Anatomical Structures, Cell Types and Biomarkers (ASCT+B) Tables to 2D Functional Tissue Unit (FTU) Reference Object Library Crosswalk
2D Ascending Thin Limb of Loop of Henle FTU for Kidney
2D Cortical Collecting Duct FTU for Kidney
2D Descending Thin Limb of Loop of Henle FTU for Kidney
2D Inner Medullary Collecting Duct FTU for Kidney
2D Nephron Functional Tissue Unit (FTU) for Kidney
2D Outer Medullary Collecting Duct FTU for Kidney
2D Renal Corpuscle Functional Tissue Unit (FTU) for Kidney
2D Thick Ascending Limb of Loop of Henle FTU for Kidney
2D Crypt of Lieberkuhn FTU for Large Intestine
2D Liver Lobule Functional Tissue Unit (FTU) for Liver
2D Bronchial Submucosal Gland FTU for Lung
2D Pulmonary Alveolus Functional Tissue Unit (FTU) for Lung
2D Sublingual Gland Ducto-Acinar for Mouth
2D Submandibular Gland Ducto-Acinar for Mouth
2D Islets of Langerhans FTU for Pancreas
2D Prostate Glandular Acinus FTU for Prostate
2D Intestinal Villus FTU for Small Intestine
2D Red Pulp Functional Tissue Unit (FTU) for Spleen
2D White Pulp Functional Tissue Unit (FTU) for Spleen
2D Thymus Lobule Functional Tissue Unit (FTU) for Thymus
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Brain
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Anatomical Systems
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Blood/Pelvis
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Blood Vasculature
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Bone Marrow
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Bone Marrow/Pelvis
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Eye
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Fallopian Tube
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Heart
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Kidney
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Knee
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Large Intestine
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Liver
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Lung
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Lymph Node
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Lymph Vasculature
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Main Bronchus
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Mouth
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Muscular System
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Ovary
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Palatine tonsil
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Pancreas
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Peripheral Nervous System
Peripheral Nervous System Organ Crosswalk
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Placenta Full Term
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Prostate
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Skeleton
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Skin
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Small Intestine
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Spinal Cord
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Spleen
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Thymus
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Trachea
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Ureter
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Urinary Bladder
Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Uterus
A collection of public dataset graphs for the HRA
cell type annotations for deepcelltypes-HuBMAP
cell type annotations for Pan-human Azimuth
cell type annotations for popular Vote (popV)
cell type annotations for Robust Image-Based Cell Annotator (RIBCA)
cell type annotations for SpaTial cELl LeARning (STELLAR)
cell type annotations for Vasculature Common Coordinate Framework (VCCF)
Federated Static HRA Registrations Dataset Graph
Enrichment graph for all public dataset graphs for the HRA
3D Reference Organ for Human Male and Female Bodies
3D Landmarks for Fallopian Tube Female Left
3D Landmarks for Fallopian Tube Female Right
3D Extraction Sites for Kidney Female Both
3D Extraction Sites for Kidney Male Both
3D Extraction Sites for Large Intestine Female
3D Extraction Sites for Large Intestine Male
3D Landmarks for Mammary Gland Female Left
3D Landmarks for Mammary Gland Female Right
3D Landmarks for Palatine Tonsil Female Left
3D Landmarks for Palatine Tonsil Female Right
3D Landmarks for Palatine Tonsil Male Left
3D Landmarks for Palatine Tonsil Male Right
3D Landmarks for Placenta Full Term Female
Millitome for UPenn Fallopian Tube, Female, Left
Millitome for UPenn Fallopian Tube, Female, Right
Millitome for UPenn Ovary, Female, Right
OMAP-1 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lymph Node with IBEX
OMAP-10: Multiplexed Antibody-Based Imaging of Human Palatine Tonsil with MACSima
OMAP-11: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Spleen with IBEX
OMAP-12: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Retina with IBEX
OMAP-13: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CODEX
OMAP-14: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with CyCIF
OMAP-15 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Intestines with CODEX
OMAP-16 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lung with CODEX
OMAP-17: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Thymus with IBEX
OMAP-18: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of human lymph node with Cell DIVE-IBEX
OMAP-19: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Palatine Tonsil with IBEX
OMAP-2 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Intestines with CODEX
OMAP-20: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of kidney with cyclic multiplexed immunofluorescence
OMAP-21: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Palatine Tonsil (FFPE) with MICS on MACSima
Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Skin with Cell DIVE
OMAP-23: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of vermiform appendix (FFPE) with MICS on MACSima
OMAP-24: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CyCIF
OMAP-25: Expanded Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lung with CODEX
OMAP-26: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with IMS-CODEX
OMAP-27: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with CODEX
OMAP-28: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Heart with CODEX
OMAP-29 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of human mouth mucosa with CODEX
OMAP-3 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Kidney with CODEX
OMAP-30 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of human salivary gland with CODEX
OMAP-31: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Fallopian Tube with CODEX
OMAP-32: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Uterus with CODEX
OMAP-33: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Ovary with CODEX
OMAP-34: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Esophagus with CODEX
OMAP-35: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Brain with Cell DIVE
OMAP-36: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Heart with MICS
OMAP-37: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Liver with MICS
OMAP-4 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Skin with Cell DIVE
OMAP-5 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Liver with SIMS
OMAP-6 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CODEX
OMAP-7 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lung with Cell DIVE
OMAP-8: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Placenta with Imaging Mass Cytometry (IMC)
OMAP-9: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with CODEX
3D reference organ for subcutaneous adipose tissue, Female
3D reference organ for subcutaneous adipose tissue, Male
Anatomical Structures, Cell Types and Biomarkers (ASCT+B) Tables to 3D Reference Object Library Crosswalk
3D Reference Organ for Blood Vasculature, Female
3D Reference Organ for Blood Vasculature, Male
3D Reference Organ for Eye, Female, Left
3D Reference Organ for Eye, Female, Right
3D Reference Organ for Fallopian Tube, Female, Left
3D Reference Organ for Fallopian Tube, Female, Right
3D reference organ for intervertebral discs, Female
3D reference organ for intervertebral discs, Male
3D Reference Organ for Kidney, Female, Left
3D Reference Organ for Kidney, Female, Right
3D Reference Organ for Kidney, Male, Left
3D Reference Organ for Kidney, Male, Right
3D Reference Organ for Knee, Female, Left
3D Reference Organ for Knee, Female, Right
3D Reference Organ for Knee, Male, Right
3D Reference Organ for Large Intestine, Female
3D Reference Organ for Large Intestine, Male
3D Reference Organ for Lymph Node, Female
3D Reference Organ for Lymph Node, Female, Left
3D Reference Organ for Lymph Node, Female, Right
3D Reference Organ for Lymph Node, Male, Left
3D Reference Organ for Lymph Node, Male, Right
3D Reference Organ for Main Bronchus, Female
3D Reference Organ for Main Bronchus, Male
3D Reference organ for Breast (mammary gland), Female left
3D Reference organ for Breast (mammary gland), Female right
3D Reference Organ for Manubrium, Female
3D Reference Organ for Ovary, Female, Left
3D Reference Organ for Ovary, Female, Right
3D Reference Organ for Palatine Tonsil, Female, Left
3D Reference Organ for Palatine Tonsil, Female, Right
3D Reference Organ for Palatine Tonsil, Male, Left
3D Reference Organ for Palatine Tonsil, Male, Right
3D Reference Organ for Placenta, Full Term, Female
3D Reference Organ for Renal Pelvis, Female, left
3D Reference Organ for Renal Pelvis, Female, right
3D Reference Organ for Renal Pelvis, male, left
3D Reference Organ for Renal Pelvis, male, right
3D Reference Organ for Small Intestine, Female
3D Reference Organ for Small Intestine, Male
3D Reference Organ for Spinal Cord, Female
3D Reference Organ for Spinal Cord, Male
3D Reference Organ Set for United, Female
3D Reference Organ for Ureter, Female, Left
3D Reference Organ for Ureter, Female, Right
3D Reference Organ for Ureter, Male, Left
3D Reference Organ for Ureter, Male, Right
3D Reference Organ for Urinary Bladder, Female
3D Reference Organ for Urinary Bladder, Male
Common Coordinate Framework Base Vocabulary
Foundational Model of Anatomy Ontology (FMA)
(Experimental) Vasculature Common Coordinate Framework Ontology