Anatomical Structures, Cell Types and Biomarkers (ASCT+B) Tables to 2D Functional Tissue Unit (FTU) Reference Object Library Crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.5
additional type: 2d-ftu
date created: 2025-06-15
name: asct-b-2d-models-crosswalk
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.4
dataset: v1.1
dataset: v1.2
dataset: v1.5
dataset: v1.0
dataset: v1.3
last: v1.5

2D Ascending Thin Limb of Loop of Henle FTU for Kidney
type: Catalog
cell count: 6
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2025-12-15
name: kidney-ascending-thin-loop-of-henle
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.3
dataset: v1.1
last: v1.3

2D Cortical Collecting Duct FTU for Kidney
type: Catalog
cell count: 15
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.4
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2025-12-15
name: kidney-cortical-collecting-duct
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.4
dataset: v1.1
dataset: v1.3
last: v1.4

2D Descending Thin Limb of Loop of Henle FTU for Kidney
type: Catalog
cell count: 6
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.2
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2025-12-15
name: kidney-descending-thin-loop-of-henle
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

2D Inner Medullary Collecting Duct FTU for Kidney
type: Catalog
cell count: 10
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.2
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2024-12-15
name: kidney-inner-medullary-collecting-duct
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

2D Nephron Functional Tissue Unit (FTU) for Kidney
type: Catalog
cell count: 16
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.2
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2023-12-15
name: kidney-nephron
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.2

2D Outer Medullary Collecting Duct FTU for Kidney
type: Catalog
cell count: 12
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2025-12-15
name: kidney-outer-medullary-collecting-duct
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.0
last: v1.3

2D Renal Corpuscle Functional Tissue Unit (FTU) for Kidney
type: Catalog
cell count: 17
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2025-12-15
name: kidney-renal-corpuscle
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.3
dataset: v1.1
dataset: v1.2
last: v1.3

2D Thick Ascending Limb of Loop of Henle FTU for Kidney
type: Catalog
cell count: 7
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.2
organ: kidney
organ id: UBERON_0002113
additional type: 2d-ftu
date created: 2024-12-15
name: kidney-thick-ascending-loop-of-henle
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

2D Crypt of Lieberkuhn FTU for Large Intestine
type: Catalog
cell count: 12
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.3
organ: large intestine
organ id: UBERON_0000059
additional type: 2d-ftu
date created: 2025-12-15
name: large-intestine-crypt-lieberkuhn
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.3

2D Liver Lobule Functional Tissue Unit (FTU) for Liver
type: Catalog
cell count: 23
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: liver
organ id: UBERON_0002107
additional type: 2d-ftu
date created: 2025-12-15
name: liver-liver-lobule
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.4
dataset: v1.1
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.4

2D Bronchial Submucosal Gland FTU for Lung
type: Catalog
cell count: 12
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.3
organ: lung
organ id: UBERON_0002048
additional type: 2d-ftu
date created: 2025-12-15
name: lung-bronchial-submucosal-gland
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.3

2D Pulmonary Alveolus Functional Tissue Unit (FTU) for Lung
type: Catalog
cell count: 16
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: lung
organ id: UBERON_0002048
additional type: 2d-ftu
date created: 2025-12-15
name: lung-pulmonary-alveolus
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.4
dataset: v1.0
last: v1.4

2D Parotid Gland Ducto-Acinar for Mouth
type: Catalog
cell count: 20
hra version: v2.4
hra version: v2.3
latest version: v1.1
organ: heart
organ: mouth
organ id: UBERON_0000165
organ id: UBERON_0000948
additional type: 2d-ftu
date created: 2025-12-15
name: mouth-parotid-gland
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

2D Sublingual Gland Ducto-Acinar for Mouth
type: Catalog
cell count: 17
hra version: v2.4
hra version: v2.3
latest version: v1.1
organ: mouth
organ id: UBERON_0000165
additional type: 2d-ftu
date created: 2025-12-15
name: mouth-sublingual-gland
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

2D Submandibular Gland Ducto-Acinar for Mouth
type: Catalog
cell count: 19
hra version: v2.4
hra version: v2.3
latest version: v1.1
organ: mouth
organ id: UBERON_0000165
additional type: 2d-ftu
date created: 2025-12-15
name: mouth-submandibular-gland
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

2D Intercalated Duct FTU for Pancreas
type: Catalog
cell count: 4
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.2
organ: pancreas
organ id: UBERON_0001264
additional type: 2d-ftu
date created: 2024-12-15
name: pancreas-intercalated-duct
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
last: v1.2

2D Islets of Langerhans FTU for Pancreas
type: Catalog
cell count: 19
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.3
organ: pancreas
organ id: UBERON_0001264
additional type: 2d-ftu
date created: 2025-12-15
name: pancreas-islets-langerhans
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
dataset: v1.3
last: v1.3

2D Acinus FTU for Pancreas
type: Catalog
cell count: 8
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.3
organ: pancreas
organ id: UBERON_0001264
additional type: 2d-ftu
date created: 2025-12-15
name: pancreas-pancreatic-acinus
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.3

2D Prostate Glandular Acinus FTU for Prostate
type: Catalog
cell count: 15
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.2
organ: prostate gland
organ id: UBERON_0002367
additional type: 2d-ftu
date created: 2023-12-15
name: prostate-prostate-glandular-acinus
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

2D Dermal Papilla FTU for Skin
type: Catalog
cell count: 5
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.2
organ: skin
organ id: UBERON_0002097
additional type: 2d-ftu
date created: 2025-12-15
name: skin-dermal-papilla
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.2

2D Epidermal Ridge FTU for Skin
type: Catalog
cell count: 18
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.2
organ: skin
organ id: UBERON_0002097
additional type: 2d-ftu
date created: 2025-06-15
name: skin-epidermal-ridge
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

2D Hair follicle for Skin
type: Catalog
cell count: 13
hra version: v2.4
hra version: v2.3
latest version: v1.1
organ: skin
organ id: UBERON_0002097
additional type: 2d-ftu
date created: 2025-12-15
name: skin-hair-follicle
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

2D Intestinal Villus FTU for Small Intestine
type: Catalog
cell count: 27
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
latest version: v1.1
organ: small intestine
organ id: UBERON_0002108
additional type: 2d-ftu
date created: 2025-12-15
name: small-intestine-villus
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

2D Red Pulp Functional Tissue Unit (FTU) for Spleen
type: Catalog
cell count: 22
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.3
organ: spleen
organ id: UBERON_0002106
additional type: 2d-ftu
date created: 2025-12-15
name: spleen-red-pulp
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.3

2D White Pulp Functional Tissue Unit (FTU) for Spleen
type: Catalog
cell count: 23
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.3
organ: spleen
organ id: UBERON_0002106
additional type: 2d-ftu
date created: 2025-12-15
name: spleen-white-pulp
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
last: v1.3

2D Thymus Lobule Functional Tissue Unit (FTU) for Thymus
type: Catalog
cell count: 25
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: thymus
organ id: UBERON_0002370
additional type: 2d-ftu
date created: 2025-12-15
name: thymus-thymus-lobule
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.4
dataset: v1.1
dataset: v1.0
last: v1.4

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Brain
type: Catalog
biomarker count: 826
cell count: 671
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.8
organ: brain
organ: spinal cord
organ id: UBERON_0002240
organ id: UBERON_0000955
additional type: asct-b
date created: 2025-12-15
name: allen-brain
version: v1.8
version: v1.7
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.4
dataset: v1.1
dataset: v1.5
dataset: v1.6
dataset: v1.2
dataset: v1.7
dataset: v1.0
dataset: v1.8
last: v1.8

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Anatomical Systems
type: Catalog
biomarker count: 1
cell count: 2
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
latest version: v1.2
organ: spinal cord
organ: kidney
organ: lung
organ: lymph node
organ: prostate gland
organ: ovary
organ: ureter
organ: mouth
organ: eye
organ: skin
organ: uterus
organ: large intestine
organ: skeleton
organ: small intestine
organ: brain
organ: urinary bladder
organ: blood vasculature
organ: trachea
organ: liver
organ: knee
organ: fallopian tube
organ: lymph vasculature
organ: extrapulmonary bronchus
organ: thymus
organ: spleen
organ: placenta
organ: heart
organ id: UBERON_0000029
organ id: UBERON_0003126
organ id: UBERON_0002107
organ id: UBERON_0001987
organ id: UBERON_0002240
organ id: UBERON_0002108
organ id: UBERON_0000165
organ id: UBERON_0000995
organ id: UBERON_0001465
organ id: UBERON_0004288
organ id: UBERON_0000056
organ id: UBERON_0002367
organ id: UBERON_0000992
organ id: UBERON_0001255
organ id: UBERON_0002048
organ id: UBERON_0000955
organ id: UBERON_0000948
organ id: UBERON_0004537
organ id: UBERON_0002370
organ id: UBERON_0004536
organ id: UBERON_0002097
organ id: UBERON_0002106
organ id: UBERON_0000970
organ id: UBERON_0000059
organ id: UBERON_0002182
organ id: UBERON_0002113
organ id: UBERON_0003889
additional type: asct-b
date created: 2025-06-15
name: anatomical-systems
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Blood/Pelvis
type: Catalog
biomarker count: 140
cell count: 45
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.4
organ: pelvis
organ id: UBERON_0001270
additional type: asct-b
date created: 2024-06-15
name: blood-pelvis
version: v1.4
version: v1.3
version: v1.2
version: v1.1
dataset: v1.3
dataset: v1.4
dataset: v1.1
dataset: v1.2
last: v1.4

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Blood Vasculature
type: Catalog
biomarker count: 11
cell count: 15
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.9
organ: blood vasculature
organ id: UBERON_0004537
additional type: asct-b
date created: 2025-12-15
name: blood-vasculature
version: v1.9
version: v1.8
version: v1.7
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.6
dataset: v1.8
dataset: v1.9
dataset: v1.2
dataset: v1.4
dataset: v1.5
dataset: v1.7
dataset: v1.0
dataset: v1.1
last: v1.9

Blood Vasculature Organ Crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.5
additional type: asct-b
date created: 2025-12-15
name: blood-vasculature-organ-crosswalk
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.4
dataset: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.5
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Bone Marrow
type: Catalog
biomarker count: 231
cell count: 63
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
latest version: v1.5
additional type: asct-b
date created: 2024-06-15
name: bone-marrow
version: v1.5
version: v1.4
dataset: v1.4
dataset: v1.5
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Bone Marrow/Pelvis
type: Catalog
biomarker count: 231
cell count: 60
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: pelvis
organ id: UBERON_0001270
additional type: asct-b
date created: 2021-12-15
name: bonemarrow-pelvis
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.3

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Eye
type: Catalog
biomarker count: 154
cell count: 48
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.4
organ: eye
organ id: UBERON_0000970
additional type: asct-b
date created: 2024-12-15
name: eye
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.4
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.4

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Fallopian Tube
type: Catalog
biomarker count: 27
cell count: 32
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.4
organ: fallopian tube
organ id: UBERON_0003889
additional type: asct-b
date created: 2024-12-15
name: fallopian-tube
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.4
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.0
last: v1.4

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Heart
type: Catalog
biomarker count: 58
cell count: 46
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.6
organ: heart
organ id: UBERON_0000948
additional type: asct-b
date created: 2025-12-15
name: heart
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.5
dataset: v1.3
dataset: v1.6
dataset: v1.1
dataset: v1.0
dataset: v1.4
dataset: v1.2
last: v1.6

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Kidney
type: Catalog
biomarker count: 187
cell count: 91
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.7
organ: kidney
organ id: UBERON_0002113
additional type: asct-b
date created: 2025-12-15
name: kidney
version: v1.7
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.4
dataset: v1.2
dataset: v1.1
dataset: v1.7
dataset: v1.0
dataset: v1.6
dataset: v1.5
last: v1.7

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Knee
type: Catalog
biomarker count: 29
cell count: 14
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: knee
organ id: UBERON_0001465
additional type: asct-b
date created: 2024-06-15
name: knee
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.3

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Large Intestine
type: Catalog
biomarker count: 93
cell count: 85
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.5
organ: large intestine
organ id: UBERON_0000059
additional type: asct-b
date created: 2025-12-15
name: large-intestine
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.2
dataset: v1.5
dataset: v1.0
dataset: v1.4
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Liver
type: Catalog
biomarker count: 74
cell count: 50
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.5
organ: liver
organ id: UBERON_0002107
additional type: asct-b
date created: 2025-12-15
name: liver
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.4
dataset: v1.5
dataset: v1.0
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Lung
type: Catalog
biomarker count: 259
cell count: 123
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.5
organ: lung
organ id: UBERON_0002048
additional type: asct-b
date created: 2024-06-15
name: lung
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.4
dataset: v1.2
dataset: v1.5
dataset: v1.3
dataset: v1.1
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Lymph Node
type: Catalog
biomarker count: 163
cell count: 70
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.4
organ: lymph node
organ id: UBERON_0000029
additional type: asct-b
date created: 2024-06-15
name: lymph-node
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.0
dataset: v1.4
dataset: v1.1
last: v1.4

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Lymph Vasculature
type: Catalog
biomarker count: 2
cell count: 4
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.5
organ: lymph node
organ: lymph vasculature
organ id: UBERON_0000029
organ id: UBERON_0004536
additional type: asct-b
date created: 2024-06-15
name: lymph-vasculature
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.5
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.4
last: v1.5

Lymph Vasculature Organ Crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.0
additional type: asct-b
date created: 2024-06-15
name: lymph-vasculature-organ-crosswalk
version: v1.0
dataset: v1.0
last: v1.0

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Main Bronchus
type: Catalog
biomarker count: 91
cell count: 43
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.3
organ: extrapulmonary bronchus
organ id: UBERON_0002182
additional type: asct-b
date created: 2025-06-15
name: main-bronchus
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.3

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Mouth
type: Catalog
biomarker count: 1
cell count: 50
hra version: v2.4
hra version: v2.3
latest version: v1.1
organ: mouth
organ id: UBERON_0000165
additional type: asct-b
date created: 2025-12-15
name: mouth
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Muscular System
type: Catalog
biomarker count: 1
cell count: 3
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.3
additional type: asct-b
date created: 2025-06-15
name: muscular-system
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.0
dataset: v1.2
dataset: v1.1
last: v1.3

Musculoskeletal Crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
latest version: v1.1
additional type: asct-b
date created: 2025-06-15
name: musculoskeletal-crosswalk
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Ovary
type: Catalog
biomarker count: 16
cell count: 20
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: blood vasculature
organ: ovary
organ id: UBERON_0000992
organ id: UBERON_0004537
additional type: asct-b
date created: 2024-06-15
name: ovary
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
last: v1.3

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Palatine tonsil
type: Catalog
biomarker count: 45
cell count: 26
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
latest version: v1.1
additional type: asct-b
date created: 2024-06-15
name: palatine-tonsil
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Pancreas
type: Catalog
biomarker count: 56
cell count: 40
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.4
organ: pancreas
organ: liver
organ id: UBERON_0002107
organ id: UBERON_0001264
additional type: asct-b
date created: 2025-12-15
name: pancreas
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.4
dataset: v1.3
dataset: v1.2
last: v1.4

Pathway crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.2
additional type: asct-b
date created: 2025-12-15
name: pathway-crosswalk
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Peripheral Nervous System
type: Catalog
biomarker count: 33
cell count: 129
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
additional type: asct-b
date created: 2024-06-15
name: peripheral-nervous-system
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

Peripheral Nervous System Organ Crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
additional type: asct-b
date created: 2024-12-15
name: peripheral-nervous-system-organ-crosswalk
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Placenta Full Term
type: Catalog
biomarker count: 45
cell count: 43
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.2
organ: placenta
organ id: UBERON_0001987
additional type: asct-b
date created: 2024-06-15
name: placenta
version: v1.2
dataset: v1.2
last: v1.2

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Placenta Full Term
type: Catalog
biomarker count: 45
cell count: 40
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.1
organ: placenta
organ id: UBERON_0001987
additional type: asct-b
date created: 2023-12-15
name: placenta-full-term
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Prostate
type: Catalog
biomarker count: 40
cell count: 38
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.1
organ: lymph vasculature
organ: blood vasculature
organ: prostate gland
organ id: UBERON_0004537
organ id: UBERON_0002367
organ id: UBERON_0004536
additional type: asct-b
date created: 2023-12-15
name: prostate
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Skeleton
type: Catalog
biomarker count: 1
cell count: 3
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
organ: skeleton
organ id: UBERON_0004288
additional type: asct-b
date created: 2024-06-15
name: skeleton
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.2

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Skin
type: Catalog
biomarker count: 69
cell count: 63
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.6
organ: skin
organ id: UBERON_0002097
additional type: asct-b
date created: 2025-12-15
name: skin
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.6
dataset: v1.5
dataset: v1.0
dataset: v1.2
dataset: v1.4
dataset: v1.1
last: v1.6

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Small Intestine
type: Catalog
biomarker count: 85
cell count: 48
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: small intestine
organ id: UBERON_0002108
additional type: asct-b
date created: 2025-12-15
name: small-intestine
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.3

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Spinal Cord
type: Catalog
biomarker count: 68
cell count: 16
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
organ: spinal cord
organ: brain
organ id: UBERON_0000955
organ id: UBERON_0002240
additional type: asct-b
date created: 2024-12-15
name: spinal-cord
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Spleen
type: Catalog
biomarker count: 154
cell count: 86
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.5
organ: spleen
organ id: UBERON_0002106
additional type: asct-b
date created: 2025-06-15
name: spleen
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.5
dataset: v1.3
dataset: v1.1
dataset: v1.4
dataset: v1.2
dataset: v1.0
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Thymus
type: Catalog
biomarker count: 366
cell count: 80
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.5
organ: thymus
organ id: UBERON_0002370
additional type: asct-b
date created: 2024-12-15
name: thymus
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.5
dataset: v1.4
dataset: v1.1
dataset: v1.0
last: v1.5

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Trachea
type: Catalog
biomarker count: 81
cell count: 37
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.0
organ: trachea
organ id: UBERON_0003126
additional type: asct-b
date created: 2023-06-15
name: trachea
version: v1.0
dataset: v1.0
last: v1.0

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Ureter
type: Catalog
biomarker count: 31
cell count: 22
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.0
organ: ureter
organ id: UBERON_0000056
additional type: asct-b
date created: 2021-12-01
name: ureter
version: v1.0
dataset: v1.0
last: v1.0

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Urinary Bladder
type: Catalog
biomarker count: 31
cell count: 36
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.0
organ: urinary bladder
organ id: UBERON_0001255
additional type: asct-b
date created: 2021-12-01
name: urinary-bladder
version: v1.0
dataset: v1.0
last: v1.0

Anatomical Structures, Cell Types, plus Biomarkers (ASCT+B) table for Uterus
type: Catalog
biomarker count: 46
cell count: 20
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: uterus
organ: blood vasculature
organ id: UBERON_0004537
organ id: UBERON_0000995
additional type: asct-b
date created: 2025-06-15
name: uterus
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

A collection of public dataset graphs for the HRA
type: Catalog
latest version: v2025
organ: skin
organ: lung
organ: lymph vasculature
organ: prostate gland
organ: kidney
organ: heart
organ id: UBERON_0000948
organ id: UBERON_0002097
organ id: UBERON_0002113
organ id: UBERON_0002048
organ id: UBERON_0002367
organ id: UBERON_0004536
additional type: collection
date created: 2025-06-15
name: ds-graphs
version: v2025
version: v2024
version: v2023
dataset: v2023
dataset: v2025
dataset: v2024
last: v2025

Human Reference Atlas (HRA)
type: Catalog
biomarker count: 2070
cell count: 1334
latest version: v2.4
organ: skeleton
organ: brain
organ: skin
organ: heart
organ: spinal cord
organ: lymph node
organ: liver
organ: lung
organ: prostate gland
organ: uterus
organ: extrapulmonary bronchus
organ: blood vasculature
organ: fallopian tube
organ: small intestine
organ: placenta
organ: eye
organ: trachea
organ: urinary bladder
organ: kidney
organ: knee
organ: ovary
organ: spleen
organ: thymus
organ: pancreas
organ: large intestine
organ: pelvis
organ: mouth
organ: lymph vasculature
organ: ureter
organ id: UBERON_0002367
organ id: UBERON_0001264
organ id: UBERON_0000955
organ id: UBERON_0004536
organ id: UBERON_0001987
organ id: UBERON_0002182
organ id: UBERON_0002107
organ id: UBERON_0001465
organ id: UBERON_0002370
organ id: UBERON_0002113
organ id: UBERON_0002108
organ id: UBERON_0000165
organ id: UBERON_0003889
organ id: UBERON_0000995
organ id: UBERON_0004288
organ id: UBERON_0000029
organ id: UBERON_0000992
organ id: UBERON_0000056
organ id: UBERON_0001255
organ id: UBERON_0002097
organ id: UBERON_0000948
organ id: UBERON_0000970
organ id: UBERON_0002240
organ id: UBERON_0003126
organ id: UBERON_0002048
organ id: UBERON_0002106
organ id: UBERON_0001270
organ id: UBERON_0000059
organ id: UBERON_0004537
additional type: collection
date created: 2025-12-15
name: hra
version: v2.4
version: v2.3
version: v2.2
version: v2.1
version: v2.0
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v2.2
dataset: v1.2
dataset: v2.3
dataset: v2.0

Human Reference Atlas API Collection
type: Catalog
biomarker count: 2070
cell count: 1334
latest version: v2.4
organ: urinary bladder
organ: uterus
organ: lymph vasculature
organ: brain
organ: skeleton
organ: fallopian tube
organ: lung
organ: spleen
organ: pelvis
organ: mouth
organ: skin
organ: large intestine
organ: ureter
organ: heart
organ: eye
organ: kidney
organ: placenta
organ: pancreas
organ: knee
organ: liver
organ: thymus
organ: prostate gland
organ: ovary
organ: trachea
organ: small intestine
organ: spinal cord
organ: lymph node
organ: blood vasculature
organ: extrapulmonary bronchus
organ id: UBERON_0001270
organ id: UBERON_0002108
organ id: UBERON_0000992
organ id: UBERON_0000059
organ id: UBERON_0004536
organ id: UBERON_0003889
organ id: UBERON_0000970
organ id: UBERON_0000165
organ id: UBERON_0004537
organ id: UBERON_0001255
organ id: UBERON_0002107
organ id: UBERON_0000056
organ id: UBERON_0002240
organ id: UBERON_0003126
organ id: UBERON_0002182
organ id: UBERON_0000029
organ id: UBERON_0002367
organ id: UBERON_0001264
organ id: UBERON_0000955
organ id: UBERON_0000948
organ id: UBERON_0002113
organ id: UBERON_0002106
organ id: UBERON_0000995
organ id: UBERON_0002048
organ id: UBERON_0002097
organ id: UBERON_0001987
organ id: UBERON_0002370
organ id: UBERON_0004288
organ id: UBERON_0001465
additional type: collection
date created: 2025-12-15
name: hra-api
version: v2.4
version: v2.3
version: v2.2
version: v2.1
version: v2.0
dataset: v2.2
dataset: v2.4
dataset: v2.1
dataset: v2.0
dataset: v2.3
last: v2.4

Human Reference Atlas OLS Collection
type: Catalog
latest version: v2.4
additional type: collection
date created: 2025-12-15
name: hra-millitomes
version: v2.4
version: v2.3
dataset: v2.4
dataset: v2.3
last: v2.4

Human Reference Atlas OLS Collection
type: Catalog
biomarker count: 2070
cell count: 1334
latest version: v2.4
organ: spinal cord
organ: blood vasculature
organ: extrapulmonary bronchus
organ: pancreas
organ: fallopian tube
organ: ureter
organ: uterus
organ: lymph node
organ: pelvis
organ: urinary bladder
organ: prostate gland
organ: knee
organ: thymus
organ: placenta
organ: liver
organ: lymph vasculature
organ: eye
organ: small intestine
organ: large intestine
organ: skin
organ: spleen
organ: kidney
organ: mouth
organ: lung
organ: brain
organ: trachea
organ: heart
organ: skeleton
organ: ovary
organ id: UBERON_0004536
organ id: UBERON_0002113
organ id: UBERON_0000970
organ id: UBERON_0002097
organ id: UBERON_0000955
organ id: UBERON_0004537
organ id: UBERON_0001987
organ id: UBERON_0001270
organ id: UBERON_0000059
organ id: UBERON_0002048
organ id: UBERON_0002106
organ id: UBERON_0002370
organ id: UBERON_0002108
organ id: UBERON_0001264
organ id: UBERON_0001465
organ id: UBERON_0003126
organ id: UBERON_0000029
organ id: UBERON_0000165
organ id: UBERON_0000948
organ id: UBERON_0000992
organ id: UBERON_0001255
organ id: UBERON_0004288
organ id: UBERON_0002107
organ id: UBERON_0002240
organ id: UBERON_0002182
organ id: UBERON_0000056
organ id: UBERON_0002367
organ id: UBERON_0003889
organ id: UBERON_0000995
additional type: collection
date created: 2025-12-15
name: hra-ols
version: v2.4
version: v2.3
version: v2.2
version: v2.1
dataset: v2.2
dataset: v2.1
dataset: v2.4
dataset: v2.3
last: v2.4

cell type annotations for Azimuth
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.3
organ: lung
organ: mouth
organ: pancreas
organ: liver
organ: brain
organ: kidney
organ: heart
organ id: UBERON_0000948
organ id: UBERON_0001264
organ id: UBERON_0002107
organ id: UBERON_0002113
organ id: UBERON_0000955
organ id: UBERON_0000165
organ id: UBERON_0002048
additional type: ctann
date created: 2025-12-15
name: azimuth
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.2
dataset: v1.0
last: v1.3

cell type annotations for CellTypist
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.2
organ: lymph node
organ: liver
organ: heart
organ: large intestine
organ: skin
organ: brain
organ: small intestine
organ: spleen
organ: lung
organ: pancreas
organ: kidney
organ id: UBERON_0002107
organ id: UBERON_0002097
organ id: UBERON_0000955
organ id: UBERON_0000029
organ id: UBERON_0002106
organ id: UBERON_0002108
organ id: UBERON_0000948
organ id: UBERON_0002113
organ id: UBERON_0001264
organ id: UBERON_0000059
organ id: UBERON_0002048
additional type: ctann
date created: 2025-12-15
name: celltypist
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.2

cell type annotations for deepcelltypes
type: Catalog
hra version: v2.4
latest version: v1.1
additional type: ctann
date created: 2025-12-15
name: deepcelltypes
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

cell type annotations for deepcelltypes-HuBMAP
type: Catalog
hra version: v2.4
latest version: v1.1
additional type: ctann
date created: 2025-12-15
name: deepcelltypes-hubmap
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

cell type annotations for FRMatch
type: Catalog
hra version: v2.4
latest version: v1.0
organ: lung
organ id: UBERON_0002048
additional type: ctann
date created: 2025-12-15
name: frmatch
version: v1.0
dataset: v1.0
last: v1.0

cell type annotations for Pan-human Azimuth
type: Catalog
hra version: v2.4
latest version: v1.1
additional type: ctann
date created: 2025-12-15
name: pan-human-azimuth
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

cell type annotations for popular Vote (popV)
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.3
organ: pancreas
organ: trachea
organ: spleen
organ: eye
organ: lung
organ: uterus
organ: mouth
organ: small intestine
organ: blood vasculature
organ: urinary bladder
organ: thymus
organ: large intestine
organ: prostate gland
organ: skin
organ: lymph node
organ: heart
organ: liver
organ id: UBERON_0000948
organ id: UBERON_0004537
organ id: UBERON_0000165
organ id: UBERON_0002107
organ id: UBERON_0002367
organ id: UBERON_0002097
organ id: UBERON_0003126
organ id: UBERON_0000995
organ id: UBERON_0001255
organ id: UBERON_0002370
organ id: UBERON_0000059
organ id: UBERON_0000029
organ id: UBERON_0000970
organ id: UBERON_0001264
organ id: UBERON_0002106
organ id: UBERON_0002108
organ id: UBERON_0002048
additional type: ctann
date created: 2025-12-15
name: popv
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.3

cell type annotations for Robust Image-Based Cell Annotator (RIBCA)
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: ctann
date created: 2025-12-15
name: ribca
version: v1.0
dataset: v1.0
last: v1.0

cell type annotations for SpaTial cELl LeARning (STELLAR)
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: ctann
date created: 2025-09-04
name: stellar
version: v1.0
dataset: v1.0
last: v1.0

cell type annotations for Vasculature Common Coordinate Framework (VCCF)
type: Catalog
hra version: v2.4
latest version: v1.1
organ: mouth
organ: lymph node
organ: spleen
organ: skin
organ: pancreas
organ: lung
organ: placenta
organ id: UBERON_0001264
organ id: UBERON_0000165
organ id: UBERON_0002048
organ id: UBERON_0000029
organ id: UBERON_0001987
organ id: UBERON_0002106
organ id: UBERON_0002097
additional type: ctann
date created: 2025-12-15
name: vccf
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

ATLAS-D2K Dataset Graph
type: Catalog
latest version: v2025
organ: prostate gland
organ id: UBERON_0002367
additional type: ds-graph
date created: 2025-06-15
name: atlas-d2k
version: v2025
version: v2024
dataset: v2024
dataset: v2025
last: v2025

GTEx Dataset Graph
type: Catalog
latest version: v2025
organ: prostate gland
organ: skin
organ: heart
organ: lung
organ id: UBERON_0000948
organ id: UBERON_0002048
organ id: UBERON_0002367
organ id: UBERON_0002097
additional type: ds-graph
date created: 2025-06-15
name: gtex
version: v2025
version: v2024
version: v2023
dataset: v2023
dataset: v2024
dataset: v2025
last: v2025

HRApop Atlas Dataset Graph
type: Catalog
latest version: v1.0
organ: kidney
organ: large intestine
organ: lymph vasculature
organ: pancreas
organ: urinary bladder
organ: small intestine
organ: prostate gland
organ: lung
organ: thymus
organ: heart
organ: liver
organ: skin
organ: spleen
organ id: UBERON_0002370
organ id: UBERON_0002097
organ id: UBERON_0002107
organ id: UBERON_0002367
organ id: UBERON_0001255
organ id: UBERON_0002108
organ id: UBERON_0004536
organ id: UBERON_0001264
organ id: UBERON_0002048
organ id: UBERON_0002113
organ id: UBERON_0000059
organ id: UBERON_0000948
organ id: UBERON_0002106
additional type: ds-graph
date created: 2025-06-15
name: hra-pop
version: v1.0
dataset: v1.0
last: v1.0

HRApop Full Dataset Graph
type: Catalog
latest version: v1.0
organ: brain
organ: heart
organ: lung
organ: prostate gland
organ: small intestine
organ: skin
organ: large intestine
organ: lymph node
organ: spleen
organ: blood vasculature
organ: eye
organ: pancreas
organ: trachea
organ: lymph vasculature
organ: urinary bladder
organ: uterus
organ: kidney
organ: thymus
organ: liver
organ id: UBERON_0001264
organ id: UBERON_0000059
organ id: UBERON_0000948
organ id: UBERON_0002097
organ id: UBERON_0000995
organ id: UBERON_0002048
organ id: UBERON_0000970
organ id: UBERON_0002367
organ id: UBERON_0000955
organ id: UBERON_0000029
organ id: UBERON_0001255
organ id: UBERON_0002106
organ id: UBERON_0002108
organ id: UBERON_0002113
organ id: UBERON_0004537
organ id: UBERON_0004536
organ id: UBERON_0003126
organ id: UBERON_0002370
organ id: UBERON_0002107
additional type: ds-graph
date created: 2025-06-15
name: hra-pop-full
version: v1.0
version: v0.11.1
version: v0.10.2
version: v0.10.1
version: v0.9.1
version: v0.8.3
version: v0.8.1
version: v0.5.2
version: v0.5.1
dataset: v0.11.1
dataset: v0.10.1
dataset: v1.0
dataset: v0.9.1
dataset: v0.8.3
dataset: v0.8.1
dataset: v0.5.2
dataset: v0.5.1
dataset: v0.10.2
last: v1.0

Federated Static HRA Registrations Dataset Graph
type: Catalog
latest version: v2025
organ: lung
organ: prostate gland
organ: skin
organ: kidney
organ: lymph vasculature
organ id: UBERON_0002048
organ id: UBERON_0004536
organ id: UBERON_0002097
organ id: UBERON_0002113
organ id: UBERON_0002367
additional type: ds-graph
date created: 2025-12-15
name: hra-registrations
version: v2025
version: v2024
version: v2023
dataset: v2024
dataset: v2025
dataset: v2023
last: v2025

HuBMAP Dataset Graph
type: Catalog
latest version: v2025
organ: lymph vasculature
organ: lung
organ: skin
organ id: UBERON_0002097
organ id: UBERON_0002048
organ id: UBERON_0004536
additional type: ds-graph
date created: 2025-12-15
name: hubmap
version: v2025
version: v2024
version: v2023
dataset: v2024
dataset: v2025
dataset: v2023
last: v2025

SenNet Dataset Graph
type: Catalog
latest version: v2025
organ: skin
organ: lymph vasculature
organ: lung
organ id: UBERON_0004536
organ id: UBERON_0002048
organ id: UBERON_0002097
additional type: ds-graph
date created: 2025-12-15
name: sennet
version: v2025
version: v2024
version: v2023
dataset: v2023
dataset: v2024
dataset: v2025
last: v2025

2D FTU Illustrations
type: Catalog
cell count: 123
latest version: v2.3
organ: lung
organ: thymus
organ: prostate gland
organ: kidney
organ: skin
organ: spleen
organ: small intestine
organ: large intestine
organ: pancreas
organ: mouth
organ: liver
organ id: UBERON_0001264
organ id: UBERON_0002108
organ id: UBERON_0000165
organ id: UBERON_0002107
organ id: UBERON_0002097
organ id: UBERON_0002113
organ id: UBERON_0002367
organ id: UBERON_0002106
organ id: UBERON_0002048
organ id: UBERON_0002370
organ id: UBERON_0000059
additional type: graph
date created: 2025-06-15
name: 2d-ftu-illustrations
version: v2.3
version: v1.3
dataset: v2.3
dataset: v1.3
last: v2.3

CCF.OWL
type: Catalog
biomarker count: 1989
cell count: 699
latest version: v2.3.0
organ: eye
organ: liver
organ: lymph node
organ: skeleton
organ: knee
organ: spleen
organ: lung
organ: heart
organ: pelvis
organ: prostate gland
organ: fallopian tube
organ: placenta
organ: blood vasculature
organ: uterus
organ: lymph vasculature
organ: ureter
organ: trachea
organ: skin
organ: spinal cord
organ: pancreas
organ: extrapulmonary bronchus
organ: ovary
organ: urinary bladder
organ: large intestine
organ: kidney
organ: thymus
organ: brain
organ: small intestine
organ id: UBERON_0001264
organ id: UBERON_0002113
organ id: UBERON_0001465
organ id: UBERON_0000970
organ id: UBERON_0002240
organ id: UBERON_0000948
organ id: UBERON_0002367
organ id: UBERON_0002107
organ id: UBERON_0004537
organ id: UBERON_0000029
organ id: UBERON_0001987
organ id: UBERON_0001270
organ id: UBERON_0002106
organ id: UBERON_0000056
organ id: UBERON_0004288
organ id: UBERON_0004536
organ id: UBERON_0000995
organ id: UBERON_0002097
organ id: UBERON_0000059
organ id: UBERON_0000955
organ id: UBERON_0002370
organ id: UBERON_0001255
organ id: UBERON_0002108
organ id: UBERON_0002182
organ id: UBERON_0000992
organ id: UBERON_0002048
organ id: UBERON_0003126
organ id: UBERON_0003889
additional type: graph
date created: 2023-12-15
name: ccf
version: v2.3.0
version: v2.2.1
version: v2.2.0
version: v2.1.0
version: v2.0.1
version: v1.10.0
version: v1.9.4
version: v1.8.0
version: v1.6.0
version: v1.0.0
dataset: v2.2.1
dataset: v2.3.0
dataset: v1.10.0
dataset: v1.8.0
dataset: v1.9.4
dataset: v2.2.0

Cell Type Annotation Tool Crosswalks
type: Catalog
cell count: 268
latest version: v1.2
organ: liver
organ: heart
organ: spleen
organ: trachea
organ: lymph node
organ: prostate gland
organ: lung
organ: skin
organ: large intestine
organ: eye
organ: urinary bladder
organ: small intestine
organ: uterus
organ: blood vasculature
organ: thymus
organ: kidney
organ: pancreas
organ id: UBERON_0002097
organ id: UBERON_0003126
organ id: UBERON_0002370
organ id: UBERON_0000948
organ id: UBERON_0002106
organ id: UBERON_0002048
organ id: UBERON_0001255
organ id: UBERON_0004537
organ id: UBERON_0000970
organ id: UBERON_0000995
organ id: UBERON_0000029
organ id: UBERON_0002113
organ id: UBERON_0001264
organ id: UBERON_0002367
organ id: UBERON_0000059
organ id: UBERON_0002107
organ id: UBERON_0002108
additional type: graph
date created: 2025-06-15
name: ctann-crosswalks
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

CTPop
type: Catalog
cell count: 35
latest version: v1.0
organ: heart
organ: prostate gland
organ: lung
organ: skin
organ: brain
organ id: UBERON_0002367
organ id: UBERON_0000948
organ id: UBERON_0000955
organ id: UBERON_0002097
organ id: UBERON_0002048
additional type: graph
date created: 2023-12-01
name: ctpop
version: v1.0
dataset: v1.0
last: v1.0

Enrichment graph for all public dataset graphs for the HRA
type: Catalog
biomarker count: 322
cell count: 149
latest version: v2025
organ: brain
organ: prostate gland
organ: ovary
organ: skin
organ: lymph node
organ: knee
organ: heart
organ: pancreas
organ: lung
organ: spleen
organ: mouth
organ: fallopian tube
organ: blood vasculature
organ: uterus
organ: urinary bladder
organ: eye
organ: placenta
organ: kidney
organ: lymph vasculature
organ: small intestine
organ: liver
organ: thymus
organ: ureter
organ: large intestine
organ id: UBERON_0001987
organ id: UBERON_0000948
organ id: UBERON_0002370
organ id: UBERON_0002113
organ id: UBERON_0002048
organ id: UBERON_0002107
organ id: UBERON_0000056
organ id: UBERON_0000955
organ id: UBERON_0001255
organ id: UBERON_0000059
organ id: UBERON_0000165
organ id: UBERON_0001465
organ id: UBERON_0002097
organ id: UBERON_0004537
organ id: UBERON_0002106
organ id: UBERON_0000995
organ id: UBERON_0002367
organ id: UBERON_0001264
organ id: UBERON_0003889
organ id: UBERON_0002108
organ id: UBERON_0000029
organ id: UBERON_0004536
organ id: UBERON_0000970
organ id: UBERON_0000992
additional type: graph
date created: 2025-12-15
name: ds-graphs-enrichments
version: v2025
version: v2024
version: v2023
dataset: v2023
dataset: v2025
dataset: v2024
last: v2025

Triples for optimized HRA API queries
type: Catalog
biomarker count: 2070
cell count: 1334
latest version: v2.4
organ: ovary
organ: thymus
organ: heart
organ: mouth
organ: extrapulmonary bronchus
organ: blood vasculature
organ: eye
organ: spinal cord
organ: ureter
organ: spleen
organ: lymph node
organ: large intestine
organ: pancreas
organ: fallopian tube
organ: skeleton
organ: uterus
organ: knee
organ: small intestine
organ: placenta
organ: skin
organ: brain
organ: lung
organ: prostate gland
organ: lymph vasculature
organ: pelvis
organ: trachea
organ: kidney
organ: urinary bladder
organ: liver
organ id: UBERON_0004537
organ id: UBERON_0000995
organ id: UBERON_0002370
organ id: UBERON_0000955
organ id: UBERON_0000029
organ id: UBERON_0001987
organ id: UBERON_0002108
organ id: UBERON_0000165
organ id: UBERON_0000992
organ id: UBERON_0001264
organ id: UBERON_0003126
organ id: UBERON_0000970
organ id: UBERON_0000056
organ id: UBERON_0002106
organ id: UBERON_0002182
organ id: UBERON_0001255
organ id: UBERON_0002048
organ id: UBERON_0002113
organ id: UBERON_0004536
organ id: UBERON_0002240
organ id: UBERON_0001270
organ id: UBERON_0000059
organ id: UBERON_0004288
organ id: UBERON_0002097
organ id: UBERON_0002367
organ id: UBERON_0002107
organ id: UBERON_0003889
organ id: UBERON_0000948
organ id: UBERON_0001465
additional type: graph
date created: 2025-12-15
name: hra-api-indexes
version: v2.4
version: v2.3
dataset: v2.4
dataset: v2.3
last: v2.4

3D Reference Organ for Human Male and Female Bodies
type: Catalog
latest version: v2.0
additional type: graph
date created: 2020-01-01
name: hra-ccf-body
version: v2.0
version: v1.2
dataset: v2.0
dataset: v1.2
last: v2.0

3D Reference Organ for Human Male and Female Bodies
type: Catalog
latest version: v2.4
organ: urinary bladder
organ: thymus
organ: extrapulmonary bronchus
organ: spinal cord
organ: liver
organ: pelvis
organ: blood vasculature
organ: heart
organ: pancreas
organ: large intestine
organ: small intestine
organ: spleen
organ: skin
organ: placenta
organ: uterus
organ: brain
organ id: UBERON_0001264
organ id: UBERON_0002240
organ id: UBERON_0002106
organ id: UBERON_0000995
organ id: UBERON_0002097
organ id: UBERON_0001987
organ id: UBERON_0000059
organ id: UBERON_0000955
organ id: UBERON_0002107
organ id: UBERON_0002370
organ id: UBERON_0002108
organ id: UBERON_0001255
organ id: UBERON_0000948
organ id: UBERON_0004537
organ id: UBERON_0002182
organ id: UBERON_0001270
additional type: graph
date created: 2025-12-15
name: hra-ccf-patches
version: v2.4
version: v2.3
version: v2.2
version: v2.1
version: v2.0
version: v1.2
dataset: v2.2
dataset: v2.3
dataset: v1.2
dataset: v2.4
dataset: v2.0
dataset: v2.1
last: v2.4

HRApop
type: Catalog
biomarker count: 1
cell count: 164
latest version: v1.0
organ: heart
organ: kidney
organ: large intestine
organ: liver
organ: skin
organ: lung
organ: urinary bladder
organ: spleen
organ: lymph vasculature
organ: small intestine
organ: prostate gland
organ: thymus
organ: pancreas
organ id: UBERON_0002097
organ id: UBERON_0001264
organ id: UBERON_0002367
organ id: UBERON_0002107
organ id: UBERON_0002108
organ id: UBERON_0002370
organ id: UBERON_0002113
organ id: UBERON_0002106
organ id: UBERON_0002048
organ id: UBERON_0000059
organ id: UBERON_0004536
organ id: UBERON_0001255
organ id: UBERON_0000948
additional type: graph
date created: 2025-06-15
name: hra-pop
version: v1.0
version: v0.11.1
version: v0.10.2
version: v0.10.1
version: v0.9.1
version: v0.8.3
version: v0.8.1
version: v0.5.2
version: v0.5.1
version: v0.5
version: v0.4
version: v0.3
dataset: v1.0
dataset: v0.5.2
dataset: v0.11.1
dataset: v0.3
dataset: v0.10.1
dataset: v0.8.1
dataset: v0.5
dataset: v0.9.1
dataset: v0.8.3
dataset: v0.5.1
dataset: v0.4
dataset: v0.10.2
last: v1.0

3D Landmarks for Eye Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: eye-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Eye Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: eye-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Eye Male Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: eye-male-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Eye Male Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: eye-male-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Fallopian Tube Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: fallopian-tube-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Fallopian Tube Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: fallopian-tube-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Heart Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: heart-female-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Heart Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: heart-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Heart Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: heart-male-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Heart Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: heart-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Kidney Female Both
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: kidney-female-both-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Kidney Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: kidney-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Kidney Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: kidney-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Kidney Male Both
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: kidney-male-both-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Kidney Male Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: kidney-male-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Kidney Male Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: kidney-male-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Knee Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: knee-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Knee Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: knee-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Knee Male Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: knee-male-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Knee Male Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: knee-male-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Large Intestine Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: large-intestine-female-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Large Intestine Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: large-intestine-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Large Intestine Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: large-intestine-male-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Large Intestine Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: large-intestine-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Larynx Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: larynx-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Larynx Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: larynx-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Liver Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: liver-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Liver Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: liver-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Lung Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: lung-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Lung Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: lung-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Main Bronchus Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: main-bronchus-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Main Bronchus Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: main-bronchus-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Mammary Gland Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: mammary-gland-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Mammary Gland Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: mammary-gland-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Mouth Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2025-06-15
name: mouth-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Mouth Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2025-06-15
name: mouth-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Ovary Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: ovary-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Ovary Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: ovary-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Palatine Tonsil Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: palatine-tonsil-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Palatine Tonsil Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: palatine-tonsil-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Palatine Tonsil Male Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: palatine-tonsil-male-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Palatine Tonsil Male Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: palatine-tonsil-male-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Pancreas Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: pancreas-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Pancreas Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: pancreas-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Placenta Full Term Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: placenta-full-term-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Small Intestine Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: small-intestine-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Small Intestine Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: small-intestine-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Spinal Cord Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: spinal-cord-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Spinal Cord Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: spinal-cord-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Spleen Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: spleen-female-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Spleen Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: spleen-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Extraction Sites for Spleen Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: spleen-male-extraction-sites
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Spleen Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: spleen-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Trachea Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: trachea-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Trachea Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: trachea-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Ureter Female Left
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: ureter-female-left-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Ureter Female Right
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: ureter-female-right-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Ureter Male Both
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: ureter-male-both-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Urinary Bladder Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: urinary-bladder-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Urinary Bladder Male
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2022-05-06
name: urinary-bladder-male-landmarks
version: v1.0
dataset: v1.0
last: v1.0

3D Landmarks for Uterus Female
type: Catalog
latest version: v1.0
additional type: landmark
date created: 2023-06-15
name: uterus-female-landmarks
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UPenn Fallopian Tube, Female, Left
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: fallopian-tube-female-left-upenn
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UPenn Fallopian Tube, Female, Right
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: fallopian-tube-female-right-upenn
version: v1.0
dataset: v1.0
last: v1.0

Millitome for VU Kidney, Female, Left
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: kidney-female-left-vu
version: v1.0
dataset: v1.0
last: v1.0

Millitome for VU Kidney, Female, Right
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: kidney-female-right-vu
version: v1.0
dataset: v1.0
last: v1.0

Millitome for VU Kidney, Male, Left
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: kidney-male-left-vu
version: v1.0
dataset: v1.0
last: v1.0

Millitome for VU Kidney, Male, Right
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: kidney-male-right-vu
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UPenn Ovary, Female, Left
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: ovary-female-left-upenn
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UPenn Ovary, Female, Right
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: ovary-female-right-upenn
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UF Pancreas, Female
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: pancreas-female-uf
version: v1.0
dataset: v1.0
last: v1.0

Millitome for VU Pancreas, Female
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: pancreas-female-vu
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UF Pancreas, Male
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: pancreas-male-uf
version: v1.0
dataset: v1.0
last: v1.0

Millitome for VU Pancreas, Male
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: pancreas-male-vu
version: v1.0
dataset: v1.0
last: v1.0

Millitome for UPenn Uterus, Female
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: millitome
date created: 2025-12-15
name: uterus-female-upenn
version: v1.0
dataset: v1.0
last: v1.0

OMAP-1 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lymph Node with IBEX
type: Catalog
biomarker count: 39
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.5
organ: lymph node
organ id: UBERON_0000029
additional type: omap
date created: 2025-06-15
name: 1-human-lymph-node-ibex
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.4
dataset: v1.5
last: v1.5

OMAP-10: Multiplexed Antibody-Based Imaging of Human Palatine Tonsil with MACSima
type: Catalog
biomarker count: 34
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: omap
date created: 2025-06-15
name: 10-palatine-tonsil-mics
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

OMAP-11: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Spleen with IBEX
type: Catalog
biomarker count: 25
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
organ: spleen
organ id: UBERON_0002106
additional type: omap
date created: 2025-06-15
name: 11-spleen-ibex
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
last: v1.2

OMAP-12: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Retina with IBEX
type: Catalog
biomarker count: 14
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: omap
date created: 2025-06-15
name: 12-eye-retina-ibex
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

OMAP-13: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CODEX
type: Catalog
biomarker count: 38
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
organ: pancreas
organ id: UBERON_0001264
additional type: omap
date created: 2025-06-15
name: 13-pancreas-codex
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
last: v1.2

OMAP-14: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with CyCIF
type: Catalog
biomarker count: 15
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
organ: kidney
organ id: UBERON_0002113
additional type: omap
date created: 2025-06-15
name: 14-kidney-cycif
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

OMAP-15 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Intestines with CODEX
type: Catalog
biomarker count: 56
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
additional type: omap
date created: 2025-06-15
name: 15-intestine-codex
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-16 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lung with CODEX
type: Catalog
biomarker count: 45
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.2
organ: lung
organ id: UBERON_0002048
additional type: omap
date created: 2025-12-15
name: 16-lung-codex
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.2

OMAP-17: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Thymus with IBEX
type: Catalog
biomarker count: 44
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
organ: thymus
organ id: UBERON_0002370
additional type: omap
date created: 2025-06-15
name: 17-thymus-ibex
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-18: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of human lymph node with Cell DIVE-IBEX
type: Catalog
biomarker count: 12
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
organ: lymph node
organ id: UBERON_0000029
additional type: omap
date created: 2025-06-15
name: 18-lymph-node-cell-dive-ibex
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-19: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Palatine Tonsil with IBEX
type: Catalog
biomarker count: 29
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
additional type: omap
date created: 2025-06-15
name: 19-palatine-tonsil-ibex
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-2 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Intestines with CODEX
type: Catalog
biomarker count: 57
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.6
additional type: omap
date created: 2025-06-15
name: 2-intestine-codex
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.5
dataset: v1.4
dataset: v1.1
dataset: v1.0
dataset: v1.6
dataset: v1.3
dataset: v1.2
last: v1.6

OMAP-20: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of kidney with cyclic multiplexed immunofluorescence
type: Catalog
biomarker count: 8
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.1
organ: kidney
organ id: UBERON_0002113
additional type: omap
date created: 2025-06-15
name: 20-kidney-ims-cycif
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-21: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Palatine Tonsil (FFPE) with MICS on MACSima
type: Catalog
biomarker count: 42
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
latest version: v1.2
additional type: omap
date created: 2025-06-15
name: 21-palatine-tonsil-mics
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Skin with Cell DIVE
type: Catalog
biomarker count: 47
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.1
organ: skin
organ id: UBERON_0002097
additional type: omap
date created: 2025-06-15
name: 22-skin-cell-dive
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

OMAP-23: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of vermiform appendix (FFPE) with MICS on MACSima
type: Catalog
biomarker count: 29
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.1
additional type: omap
date created: 2025-06-15
name: 23-vermiform-appendix-mics
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-24: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CyCIF
type: Catalog
biomarker count: 12
hra version: v2.4
hra version: v2.3
latest version: v1.0
organ: pancreas
organ id: UBERON_0001264
additional type: omap
date created: 2025-06-15
name: 24-pancreas-cycif
version: v1.0
dataset: v1.0
last: v1.0

OMAP-25: Expanded Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lung with CODEX
type: Catalog
biomarker count: 50
hra version: v2.4
hra version: v2.3
latest version: v1.1
organ: lung
organ id: UBERON_0002048
additional type: omap
date created: 2025-12-15
name: 25-lung-codex
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

OMAP-26: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with IMS-CODEX
type: Catalog
biomarker count: 23
hra version: v2.4
hra version: v2.3
latest version: v1.0
organ: kidney
organ id: UBERON_0002113
additional type: omap
date created: 2025-06-15
name: 26-kidney-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-27: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with CODEX
type: Catalog
biomarker count: 42
hra version: v2.4
hra version: v2.3
latest version: v1.0
organ: kidney
organ id: UBERON_0002113
additional type: omap
date created: 2025-06-15
name: 27-kidney-ims-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-28: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Heart with CODEX
type: Catalog
biomarker count: 35
hra version: v2.4
hra version: v2.3
latest version: v1.0
organ: heart
organ id: UBERON_0000948
additional type: omap
date created: 2025-06-15
name: 28-heart-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-29 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of human mouth mucosa with CODEX
type: Catalog
biomarker count: 47
hra version: v2.4
hra version: v2.3
latest version: v1.0
additional type: omap
date created: 2025-06-15
name: 29-mouth-mucosa-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-3 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Kidney with CODEX
type: Catalog
biomarker count: 19
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: kidney
organ id: UBERON_0002113
additional type: omap
date created: 2025-06-15
name: 3-kidney-codex
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.4
dataset: v1.3
dataset: v1.0
last: v1.4

OMAP-30 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of human salivary gland with CODEX
type: Catalog
biomarker count: 47
hra version: v2.4
hra version: v2.3
latest version: v1.0
additional type: omap
date created: 2025-06-15
name: 30-salivary-gland-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-31: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Fallopian Tube with CODEX
type: Catalog
biomarker count: 44
hra version: v2.4
latest version: v1.0
organ: fallopian tube
organ id: UBERON_0003889
additional type: omap
date created: 2025-12-15
name: 31-fallopian-tube-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-32: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Uterus with CODEX
type: Catalog
biomarker count: 41
hra version: v2.4
latest version: v1.0
organ: uterus
organ id: UBERON_0000995
additional type: omap
date created: 2025-12-15
name: 32-uterus-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-33: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Ovary with CODEX
type: Catalog
biomarker count: 49
hra version: v2.4
latest version: v1.0
organ: ovary
organ id: UBERON_0000992
additional type: omap
date created: 2025-12-15
name: 33-ovary-codes
version: v1.0
dataset: v1.0
last: v1.0

OMAP-34: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Esophagus with CODEX
type: Catalog
biomarker count: 23
hra version: v2.4
latest version: v1.0
additional type: omap
date created: 2025-12-15
name: 34-esophagus-codex
version: v1.0
dataset: v1.0
last: v1.0

OMAP-35: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Brain with Cell DIVE
type: Catalog
biomarker count: 11
hra version: v2.4
latest version: v1.0
organ: brain
organ id: UBERON_0000955
additional type: omap
date created: 2025-12-15
name: 35-brain-cell-dive
version: v1.0
dataset: v1.0
last: v1.0

OMAP-36: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Heart with MICS
type: Catalog
biomarker count: 23
hra version: v2.4
latest version: v1.0
organ: heart
organ id: UBERON_0000948
additional type: omap
date created: 2025-12-15
name: 36-heart-mics
version: v1.0
dataset: v1.0
last: v1.0

OMAP-37: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Liver with MICS
type: Catalog
biomarker count: 35
hra version: v2.4
latest version: v1.0
organ: liver
organ id: UBERON_0002107
additional type: omap
date created: 2025-12-15
name: 37-liver-mics
version: v1.0
dataset: v1.0
last: v1.0

OMAP-4 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Skin with Cell DIVE
type: Catalog
biomarker count: 36
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: skin
organ id: UBERON_0002097
additional type: omap
date created: 2025-06-15
name: 4-skin-cell-dive
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.1
dataset: v1.0
dataset: v1.2
dataset: v1.4
last: v1.4

OMAP-5 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Liver with SIMS
type: Catalog
biomarker count: 17
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: liver
organ id: UBERON_0002107
additional type: omap
date created: 2025-06-15
name: 5-liver-sims
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.4
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.4

OMAP-6 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Pancreas with CODEX
type: Catalog
biomarker count: 11
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: pancreas
organ id: UBERON_0001264
additional type: omap
date created: 2025-06-15
name: 6-pancreas-codex
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.0
dataset: v1.1
dataset: v1.4
last: v1.4

OMAP-7 Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Lung with Cell DIVE
type: Catalog
biomarker count: 35
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.4
organ: lung
organ id: UBERON_0002048
additional type: omap
date created: 2025-06-15
name: 7-lung-cell-dive
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.1
dataset: v1.2
dataset: v1.4
dataset: v1.0
last: v1.4

OMAP-8: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Placenta with Imaging Mass Cytometry (IMC)
type: Catalog
biomarker count: 38
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
organ: placenta
organ id: UBERON_0001987
additional type: omap
date created: 2025-06-15
name: 8-placenta-full-term-imc
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.2

OMAP-9: Organ Mapping Antibody Panel (OMAP) for Multiplexed Antibody-Based Imaging of Human Kidney with CODEX
type: Catalog
biomarker count: 37
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.4
organ: kidney
organ id: UBERON_0002113
additional type: omap
date created: 2025-06-15
name: 9-kidney-codex
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
dataset: v1.4
last: v1.4

3D reference organ for subcutaneous adipose tissue, Female
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: ref-organ
date created: 2025-12-15
name: adipose-female
version: v1.0
dataset: v1.0
last: v1.0

3D reference organ for subcutaneous adipose tissue, Male
type: Catalog
hra version: v2.4
latest version: v1.0
additional type: ref-organ
date created: 2025-12-15
name: adipose-male
version: v1.0
dataset: v1.0
last: v1.0

Anatomical Structures, Cell Types and Biomarkers (ASCT+B) Tables to 3D Reference Object Library Crosswalk
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.9
additional type: ref-organ
date created: 2025-12-15
name: asct-b-3d-models-crosswalk
version: v1.9
version: v1.8
version: v1.7
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.5
dataset: v1.8
dataset: v1.2
dataset: v1.9
dataset: v1.3
dataset: v1.6
dataset: v1.0
dataset: v1.7
dataset: v1.1
dataset: v1.4
last: v1.9

3D Reference Organ for Blood Vasculature, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: blood vasculature
organ: liver
organ: eye
organ: heart
organ id: UBERON_0000948
organ id: UBERON_0000970
organ id: UBERON_0004537
organ id: UBERON_0002107
additional type: ref-organ
date created: 2024-06-15
name: blood-vasculature-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.0
dataset: v1.2
last: v1.3

3D Reference Organ for Blood Vasculature, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: eye
organ: liver
organ: heart
organ: blood vasculature
organ id: UBERON_0004537
organ id: UBERON_0000948
organ id: UBERON_0000970
organ id: UBERON_0002107
additional type: ref-organ
date created: 2024-06-15
name: blood-vasculature-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.3

3D Reference Organ for Brain, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.4
organ: brain
organ id: UBERON_0000955
additional type: ref-organ
date created: 2024-06-15
name: brain-female
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.3
dataset: v1.4
dataset: v1.1
last: v1.4

3D Reference Organ for Brain, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.4
organ: brain
organ id: UBERON_0000955
additional type: ref-organ
date created: 2024-06-15
name: brain-male
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.0
dataset: v1.4
dataset: v1.1
dataset: v1.2
last: v1.4

3D Reference Organ for Eye, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: heart
organ: eye
organ id: UBERON_0000948
organ id: UBERON_0000970
additional type: ref-organ
date created: 2024-06-15
name: eye-female-left
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.3

3D Reference Organ for Eye, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: eye
organ: heart
organ id: UBERON_0000948
organ id: UBERON_0000970
additional type: ref-organ
date created: 2024-06-15
name: eye-female-right
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
last: v1.3

3D Reference Organ for Eye, Male, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: heart
organ: eye
organ id: UBERON_0000970
organ id: UBERON_0000948
additional type: ref-organ
date created: 2024-06-15
name: eye-male-left
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
last: v1.3

3D Reference Organ for Eye, Male, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: heart
organ: eye
organ id: UBERON_0000970
organ id: UBERON_0000948
additional type: ref-organ
date created: 2024-06-15
name: eye-male-right
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.3

3D Reference Organ for Fallopian Tube, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: fallopian tube
organ id: UBERON_0003889
additional type: ref-organ
date created: 2024-06-15
name: fallopian-tube-female-left
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.2

3D Reference Organ for Fallopian Tube, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: fallopian tube
organ id: UBERON_0003889
additional type: ref-organ
date created: 2024-06-15
name: fallopian-tube-female-right
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

3D Reference Organ for Heart, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: heart
organ id: UBERON_0000948
additional type: ref-organ
date created: 2024-06-15
name: heart-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
dataset: v1.0
last: v1.3

3D Reference Organ for Heart, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: heart
organ id: UBERON_0000948
additional type: ref-organ
date created: 2024-06-15
name: heart-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.3

3D reference organ for intervertebral discs, Female
type: Catalog
hra version: v2.4
latest version: v1.0
organ: skeleton
organ id: UBERON_0004288
additional type: ref-organ
date created: 2025-12-15
name: intervertebral-disk-female
version: v1.0
dataset: v1.0
last: v1.0

3D reference organ for intervertebral discs, Male
type: Catalog
hra version: v2.4
latest version: v1.0
organ: skeleton
organ id: UBERON_0004288
additional type: ref-organ
date created: 2025-12-15
name: intervertebral-disk-male
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Kidney, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: ref-organ
date created: 2024-06-15
name: kidney-female-left
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.3
last: v1.3

3D Reference Organ for Kidney, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: ref-organ
date created: 2024-06-15
name: kidney-female-right
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.3
dataset: v1.1
dataset: v1.0
last: v1.3

3D Reference Organ for Kidney, Male, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: ref-organ
date created: 2024-06-15
name: kidney-male-left
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
dataset: v1.3
last: v1.3

3D Reference Organ for Kidney, Male, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: kidney
organ id: UBERON_0002113
additional type: ref-organ
date created: 2024-06-15
name: kidney-male-right
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
last: v1.3

3D Reference Organ for Knee, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
additional type: ref-organ
date created: 2024-12-15
name: knee-female-left
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.0
dataset: v1.2
last: v1.3

3D Reference Organ for Knee, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
additional type: ref-organ
date created: 2024-12-15
name: knee-female-right
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.3

3D Reference Organ for Knee, Male, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
additional type: ref-organ
date created: 2024-06-15
name: knee-male-left
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

3D Reference Organ for Knee, Male, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
additional type: ref-organ
date created: 2024-06-15
name: knee-male-right
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Large Intestine, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: large intestine
organ id: UBERON_0000059
additional type: ref-organ
date created: 2024-06-15
name: large-intestine-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
dataset: v1.0
last: v1.3

3D Reference Organ for Large Intestine, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: large intestine
organ id: UBERON_0000059
additional type: ref-organ
date created: 2024-06-15
name: large-intestine-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
last: v1.3

3D Reference Organ for Larynx, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
additional type: ref-organ
date created: 2024-06-15
name: larynx-female
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ for Larynx, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
additional type: ref-organ
date created: 2024-06-15
name: larynx-male
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ for Liver, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: liver
organ id: UBERON_0002107
additional type: ref-organ
date created: 2024-06-15
name: liver-female
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Liver, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: liver
organ id: UBERON_0002107
additional type: ref-organ
date created: 2024-06-15
name: liver-male
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

3D Reference Organ for Lung, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.4
organ: lung
organ id: UBERON_0002048
additional type: ref-organ
date created: 2024-06-15
name: lung-female
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.4
dataset: v1.2
dataset: v1.0
dataset: v1.3
dataset: v1.1
last: v1.4

3D Reference Organ for Lung, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.4
organ: lung
organ id: UBERON_0002048
additional type: ref-organ
date created: 2024-06-15
name: lung-male
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.0
dataset: v1.2
dataset: v1.4
last: v1.4

3D Reference Organ for Lymph Node, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.4
organ: lymph node
organ: lymph vasculature
organ id: UBERON_0004536
organ id: UBERON_0000029
additional type: ref-organ
date created: 2024-12-15
name: lymph-node-female
version: v1.4
version: v1.3
version: v1.2
version: v1.1
dataset: v1.3
dataset: v1.2
dataset: v1.4
dataset: v1.1
last: v1.4

3D Reference Organ for Lymph Node, Female, Left
type: Catalog
hra version: v1.0
latest version: v1.0
organ: lymph node
organ: lymph vasculature
organ id: UBERON_0000029
organ id: UBERON_0004536
additional type: ref-organ
date created: 2021-03-12
name: lymph-node-female-left
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Lymph Node, Female, Right
type: Catalog
hra version: v1.0
latest version: v1.0
organ: lymph vasculature
organ: lymph node
organ id: UBERON_0000029
organ id: UBERON_0004536
additional type: ref-organ
date created: 2021-03-12
name: lymph-node-female-right
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Lymph Node, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.4
organ: lymph node
organ: lymph vasculature
organ id: UBERON_0000029
organ id: UBERON_0004536
additional type: ref-organ
date created: 2024-12-15
name: lymph-node-male
version: v1.4
version: v1.3
version: v1.2
version: v1.1
dataset: v1.3
dataset: v1.2
dataset: v1.1
dataset: v1.4
last: v1.4

3D Reference Organ for Lymph Node, Male, Left
type: Catalog
hra version: v1.0
latest version: v1.0
organ: lymph node
organ: lymph vasculature
organ id: UBERON_0000029
organ id: UBERON_0004536
additional type: ref-organ
date created: 2021-03-12
name: lymph-node-male-left
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Lymph Node, Male, Right
type: Catalog
hra version: v1.0
latest version: v1.0
organ: lymph vasculature
organ: lymph node
organ id: UBERON_0004536
organ id: UBERON_0000029
additional type: ref-organ
date created: 2021-03-12
name: lymph-node-male-right
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Main Bronchus, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
organ: extrapulmonary bronchus
organ id: UBERON_0002182
additional type: ref-organ
date created: 2024-06-15
name: main-bronchus-female
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ for Main Bronchus, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
organ: extrapulmonary bronchus
organ id: UBERON_0002182
additional type: ref-organ
date created: 2024-06-15
name: main-bronchus-male
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference organ for Breast (mammary gland), Female left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.1
additional type: ref-organ
date created: 2024-06-15
name: mammary-gland-female-left
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

3D Reference organ for Breast (mammary gland), Female right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
latest version: v1.1
additional type: ref-organ
date created: 2024-06-15
name: mammary-gland-female-right
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ for Manubrium, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.0
additional type: ref-organ
date created: 2024-12-15
name: manubrium-female
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Mouth, Female
type: Catalog
hra version: v2.4
hra version: v2.3
latest version: v1.0
organ: skeleton
organ: mouth
organ: heart
organ id: UBERON_0000948
organ id: UBERON_0000165
organ id: UBERON_0004288
additional type: ref-organ
date created: 2025-06-15
name: mouth-female
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Mouth, Male
type: Catalog
hra version: v2.4
hra version: v2.3
latest version: v1.0
organ: mouth
organ: heart
organ id: UBERON_0000948
organ id: UBERON_0000165
additional type: ref-organ
date created: 2025-06-15
name: mouth-male
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Ovary, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: ovary
organ id: UBERON_0000992
additional type: ref-organ
date created: 2024-12-15
name: ovary-female-left
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.0
dataset: v1.2
last: v1.3

3D Reference Organ for Ovary, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: ovary
organ id: UBERON_0000992
additional type: ref-organ
date created: 2024-12-15
name: ovary-female-right
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.0
dataset: v1.2
last: v1.3

3D Reference Organ for Palatine Tonsil, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: ref-organ
date created: 2025-06-15
name: palatine-tonsil-female-left
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.2

3D Reference Organ for Palatine Tonsil, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: ref-organ
date created: 2025-06-15
name: palatine-tonsil-female-right
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.2

3D Reference Organ for Palatine Tonsil, Male, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: ref-organ
date created: 2025-06-15
name: palatine-tonsil-male-left
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.2

3D Reference Organ for Palatine Tonsil, Male, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: ref-organ
date created: 2025-06-15
name: palatine-tonsil-male-right
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Pancreas, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: pancreas
organ id: UBERON_0001264
additional type: ref-organ
date created: 2024-06-15
name: pancreas-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.3
dataset: v1.0
dataset: v1.1
dataset: v1.2
last: v1.3

3D Reference Organ for Pancreas, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.3
organ: pancreas
organ id: UBERON_0001264
additional type: ref-organ
date created: 2024-06-15
name: pancreas-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.3
dataset: v1.0
dataset: v1.2
last: v1.3

3D Reference Organ for Pelvis, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: skeleton
organ: pelvis
organ id: UBERON_0001270
organ id: UBERON_0004288
additional type: ref-organ
date created: 2024-06-15
name: pelvis-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
dataset: v1.3
last: v1.3

3D Reference Organ for Pelvis, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: pelvis
organ: skeleton
organ id: UBERON_0001270
organ id: UBERON_0004288
additional type: ref-organ
date created: 2024-06-15
name: pelvis-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.3
dataset: v1.0
dataset: v1.1
last: v1.3

3D Reference Organ for Placenta, Full Term, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.1
organ: placenta
organ: blood vasculature
organ id: UBERON_0004537
organ id: UBERON_0001987
additional type: ref-organ
date created: 2024-06-15
name: placenta-full-term-female
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ for Prostate, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: prostate gland
organ id: UBERON_0002367
additional type: ref-organ
date created: 2024-06-15
name: prostate-male
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Renal Pelvis, Female, left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.0
organ: ureter
organ: kidney
organ id: UBERON_0000056
organ id: UBERON_0002113
additional type: ref-organ
date created: 2021-12-15
name: renal-pelvis-female-left
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Renal Pelvis, Female, right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.0
organ: ureter
organ: kidney
organ id: UBERON_0000056
organ id: UBERON_0002113
additional type: ref-organ
date created: 2021-12-15
name: renal-pelvis-female-right
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Renal Pelvis, male, left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.0
organ: kidney
organ: ureter
organ id: UBERON_0002113
organ id: UBERON_0000056
additional type: ref-organ
date created: 2021-12-15
name: renal-pelvis-male-left
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Renal Pelvis, male, right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.0
organ: ureter
organ: kidney
organ id: UBERON_0002113
organ id: UBERON_0000056
additional type: ref-organ
date created: 2024-12-15
name: renal-pelvis-male-right
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Skin, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.5
organ: skin
organ id: UBERON_0002097
additional type: ref-organ
date created: 2025-06-15
name: skin-female
version: v1.5
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.5
dataset: v1.4
dataset: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.3
last: v1.5

3D Reference Organ for Skin, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.4
organ: skin
organ id: UBERON_0002097
additional type: ref-organ
date created: 2025-06-15
name: skin-male
version: v1.4
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.4
dataset: v1.2
dataset: v1.0
dataset: v1.3
dataset: v1.1
last: v1.4

3D Reference Organ for Small Intestine, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: small intestine
organ id: UBERON_0002108
additional type: ref-organ
date created: 2024-06-15
name: small-intestine-female
version: v1.2
version: v1.1
dataset: v1.1
dataset: v1.2
last: v1.2

3D Reference Organ for Small Intestine, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: small intestine
organ id: UBERON_0002108
additional type: ref-organ
date created: 2024-06-15
name: small-intestine-male
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Spinal Cord, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.1
organ: brain
organ: spinal cord
organ id: UBERON_0000955
organ id: UBERON_0002240
additional type: ref-organ
date created: 2024-06-15
name: spinal-cord-female
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

3D Reference Organ for Spinal Cord, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.1
organ: brain
organ: spinal cord
organ id: UBERON_0002240
organ id: UBERON_0000955
additional type: ref-organ
date created: 2024-06-15
name: spinal-cord-male
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ for Spleen, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: spleen
organ id: UBERON_0002106
additional type: ref-organ
date created: 2024-06-15
name: spleen-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
dataset: v1.3
last: v1.3

3D Reference Organ for Spleen, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: spleen
organ id: UBERON_0002106
additional type: ref-organ
date created: 2024-06-15
name: spleen-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
last: v1.3

3D Reference Organ for Sternum, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
latest version: v1.0
organ: skeleton
organ id: UBERON_0004288
additional type: ref-organ
date created: 2024-12-15
name: sternum-female
version: v1.0
dataset: v1.0
last: v1.0

3D Reference Organ for Thymus, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: thymus
organ id: UBERON_0002370
additional type: ref-organ
date created: 2024-06-15
name: thymus-female
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.3
dataset: v1.2
dataset: v1.1
last: v1.3

3D Reference Organ for Thymus, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
hra version: v1.0
latest version: v1.3
organ: thymus
organ id: UBERON_0002370
additional type: ref-organ
date created: 2024-06-15
name: thymus-male
version: v1.3
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.3
dataset: v1.2
last: v1.3

3D Reference Organ for Trachea, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
organ: trachea
organ id: UBERON_0003126
additional type: ref-organ
date created: 2024-06-15
name: trachea-female
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
last: v1.1

3D Reference Organ for Trachea, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.1
organ: trachea
organ id: UBERON_0003126
additional type: ref-organ
date created: 2024-06-15
name: trachea-male
version: v1.1
version: v1.0
dataset: v1.0
dataset: v1.1
last: v1.1

3D Reference Organ Set for United, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.9
organ: lung
organ: brain
organ: heart
organ: trachea
organ: kidney
organ: spleen
organ: extrapulmonary bronchus
organ: spinal cord
organ: placenta
organ: mouth
organ: uterus
organ: lymph node
organ: skin
organ: knee
organ: liver
organ: thymus
organ: ovary
organ: blood vasculature
organ: lymph vasculature
organ: eye
organ: fallopian tube
organ: ureter
organ: skeleton
organ: urinary bladder
organ: pelvis
organ id: UBERON_0002113
organ id: UBERON_0002240
organ id: UBERON_0004537
organ id: UBERON_0001270
organ id: UBERON_0002370
organ id: UBERON_0001465
organ id: UBERON_0004536
organ id: UBERON_0000165
organ id: UBERON_0002182
organ id: UBERON_0001987
organ id: UBERON_0002106
organ id: UBERON_0000029
organ id: UBERON_0003126
organ id: UBERON_0000056
organ id: UBERON_0003889
organ id: UBERON_0002048
organ id: UBERON_0000955
organ id: UBERON_0000992
organ id: UBERON_0001255
organ id: UBERON_0002097
organ id: UBERON_0004288
organ id: UBERON_0000970
organ id: UBERON_0002107
organ id: UBERON_0000995
organ id: UBERON_0000948
additional type: ref-organ
date created: 2025-12-15
name: united-female
version: v1.9
version: v1.8
version: v1.7
version: v1.6
version: v1.5
version: v1.4
version: v1.3
version: v1.2
dataset: v1.9
dataset: v1.6
dataset: v1.4
dataset: v1.7
dataset: v1.5
dataset: v1.2
dataset: v1.8
dataset: v1.3

3D Reference Organ Set for United, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
latest version: v1.9
organ: small intestine
organ: spleen
organ: thymus
organ: pelvis
organ: blood vasculature
organ: knee
organ: skin
organ: pancreas
organ: heart
organ: trachea
organ: skeleton
organ: lymph node
organ: spinal cord
organ: liver
organ: large intestine
organ: urinary bladder
organ: kidney
organ: lymph vasculature
organ: eye
organ: ureter
organ: prostate gland
organ: lung
organ: brain
organ: extrapulmonary bronchus
organ id: UBERON_0000955
organ id: UBERON_0000029
organ id: UBERON_0002106
organ id: UBERON_0002097
organ id: UBERON_0002240
organ id: UBERON_0000056
organ id: UBERON_0002367
organ id: UBERON_0001270
organ id: UBERON_0004288
organ id: UBERON_0001255
organ id: UBERON_0000970
organ id: UBERON_0002107
organ id: UBERON_0000948
organ id: UBERON_0002370
organ id: UBERON_0002108
organ id: UBERON_0000059
organ id: UBERON_0003126
organ id: UBERON_0002113
organ id: UBERON_0004537
organ id: UBERON_0004536
organ id: UBERON_0001264
organ id: UBERON_0002182
organ id: UBERON_0002048
organ id: UBERON_0001465
additional type: ref-organ
date created: 2025-12-15
name: united-male
version: v1.9
version: v1.8
version: v1.7
version: v1.6
version: v1.5
version: v1.4
version: v1.2
dataset: v1.8
dataset: v1.2
dataset: v1.4
dataset: v1.5
dataset: v1.6
dataset: v1.7
dataset: v1.9
last: v1.9

3D Reference Organ for Ureter, Female, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: ureter
organ id: UBERON_0000056
additional type: ref-organ
date created: 2024-06-15
name: ureter-female-left
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Ureter, Female, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: ureter
organ id: UBERON_0000056
additional type: ref-organ
date created: 2024-06-15
name: ureter-female-right
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Ureter, Male, Left
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: ureter
organ id: UBERON_0000056
additional type: ref-organ
date created: 2024-06-15
name: ureter-male-left
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.2

3D Reference Organ for Ureter, Male, Right
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: ureter
organ id: UBERON_0000056
additional type: ref-organ
date created: 2024-06-15
name: ureter-male-right
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Urinary Bladder, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: urinary bladder
organ id: UBERON_0001255
additional type: ref-organ
date created: 2024-06-15
name: urinary-bladder-female
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.0
dataset: v1.1
last: v1.2

3D Reference Organ for Urinary Bladder, Male
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: urinary bladder
organ id: UBERON_0001255
additional type: ref-organ
date created: 2024-06-15
name: urinary-bladder-male
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.0
dataset: v1.2
last: v1.2

3D Reference Organ for Uterus, Female
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
hra version: v1.3
hra version: v1.2
hra version: v1.1
latest version: v1.2
organ: uterus
organ id: UBERON_0000995
additional type: ref-organ
date created: 2024-06-15
name: uterus-female
version: v1.2
version: v1.1
version: v1.0
dataset: v1.1
dataset: v1.2
dataset: v1.0
last: v1.2

HRA 2d-ftu linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: 2d-ftu
version: v1.0
dataset: v1.0
last: v1.0

HRA 2d-ftu-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: 2d-ftu-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA asct-b linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: asct-b
version: v1.0
dataset: v1.0
last: v1.0

HRA asct-b-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: asct-b-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA basic linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: basic
version: v1.0
dataset: v1.0
last: v1.0

HRA basic-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: basic-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA cell-summary linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: cell-summary
version: v1.0
dataset: v1.0
last: v1.0

HRA collection linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: collection
version: v1.0
dataset: v1.0
last: v1.0

HRA collection-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: collection-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA collision linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: collision
version: v1.0
dataset: v1.0
last: v1.0

HRA corridor linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: corridor
version: v1.0
dataset: v1.0
last: v1.0

HRA dataset linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: dataset
version: v1.0
dataset: v1.0
last: v1.0

HRA donor linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: donor
version: v1.0
dataset: v1.0
last: v1.0

HRA ds-graph linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: ds-graph
version: v1.0
dataset: v1.0
last: v1.0

HRA ds-graph-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: ds-graph-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA graph linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: graph
version: v1.0
dataset: v1.0
last: v1.0

HRA graph-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: graph-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA hra-pop-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: hra-pop-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA landmark linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: landmark
version: v1.0
dataset: v1.0
last: v1.0

HRA landmark-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: landmark-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA omap linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: omap
version: v1.0
dataset: v1.0
last: v1.0

HRA omap-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: omap-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA ref-organ linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: ref-organ
version: v1.0
dataset: v1.0
last: v1.0

HRA ref-organ-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: ref-organ-metadata
version: v1.0
dataset: v1.0
last: v1.0

HRA sample linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: sample
version: v1.0
dataset: v1.0
last: v1.0

HRA spatial linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: spatial
version: v1.0
dataset: v1.0
last: v1.0

HRA vocab linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: vocab
version: v1.0
dataset: v1.0
last: v1.0

HRA vocab-metadata linkml schema
type: Catalog
latest version: v1.0
additional type: schema
date created: 2024-12-15
name: vocab-metadata
version: v1.0
dataset: v1.0
last: v1.0

Blood Vasculature Geometry
type: Catalog
hra version: v2.4
hra version: v2.3
hra version: v2.2
hra version: v2.1
hra version: v2.0
hra version: v1.4
latest version: v1.2
additional type: vascular-geometry
date created: 2025-06-15
name: blood-vasculature-geometry
version: v1.2
version: v1.1
version: v1.0
dataset: v1.2
dataset: v1.1
dataset: v1.0
last: v1.2

Common Coordinate Framework Base Vocabulary
type: Catalog
cell count: 2
latest version: v3.0.0
additional type: vocab
date created: 2024-06-15
name: ccf
version: v3.0.0
version: v2.2.1
dataset: v2.2.1
dataset: v3.0.0
last: v3.0.0

Cell Ontology
type: Catalog
cell count: 514
latest version: v20251125
organ: large intestine
organ: ovary
organ: lymph node
organ: skin
organ: urinary bladder
organ: fallopian tube
organ: uterus
organ: thymus
organ: spinal cord
organ: trachea
organ: spleen
organ: kidney
organ: eye
organ: small intestine
organ: placenta
organ: lymph vasculature
organ: blood vasculature
organ: liver
organ: prostate gland
organ: pancreas
organ: lung
organ: ureter
organ: heart
organ: brain
organ id: UBERON_0002106
organ id: UBERON_0004536
organ id: UBERON_0001987
organ id: UBERON_0002108
organ id: UBERON_0000970
organ id: UBERON_0002113
organ id: UBERON_0000059
organ id: UBERON_0004537
organ id: UBERON_0000995
organ id: UBERON_0002370
organ id: UBERON_0000029
organ id: UBERON_0000948
organ id: UBERON_0002097
organ id: UBERON_0002048
organ id: UBERON_0000955
organ id: UBERON_0002107
organ id: UBERON_0002240
organ id: UBERON_0001264
organ id: UBERON_0003889
organ id: UBERON_0000992
organ id: UBERON_0002367
organ id: UBERON_0000056
organ id: UBERON_0001255
organ id: UBERON_0003126
additional type: vocab
date created: 2025-11-25
name: cl
version: v20251125
version: v20250410
version: v20240926
version: v20240515
version: v20240213
version: v20231205
dataset: v20240515
dataset: v20240213
dataset: v20251125
dataset: v20231205
dataset: v20250410
dataset: v20240926
last: v20251125

Foundational Model of Anatomy Ontology (FMA)
type: Catalog
latest version: v5.0.0
additional type: vocab
date created: 2019-04-24
name: fma
version: v5.0.0
dataset: v5.0.0
last: v5.0.0

HGNC Ontology
type: Catalog
biomarker count: 1759
latest version: v20250912
additional type: vocab
date created: 2025-09-12
name: hgnc
version: v20250912
version: v20240304
version: v20230918
dataset: v20230918
dataset: v20240304
dataset: v20250912
last: v20250912

Human Phenotype Ontology
type: Catalog
cell count: 251
latest version: v20251124
organ: brain
organ: lymph node
organ: mouth
organ: kidney
organ: spleen
organ: spinal cord
organ: thymus
organ: liver
organ: placenta
organ: eye
organ: uterus
organ: urinary bladder
organ: trachea
organ: prostate gland
organ: pelvis
organ: small intestine
organ: fallopian tube
organ: pancreas
organ: lung
organ: large intestine
organ: ureter
organ: lymph vasculature
organ: heart
organ: skeleton
organ: ovary
organ: blood vasculature
organ: skin
organ: knee
organ id: UBERON_0000165
organ id: UBERON_0004537
organ id: UBERON_0000955
organ id: UBERON_0000029
organ id: UBERON_0002370
organ id: UBERON_0002107
organ id: UBERON_0000970
organ id: UBERON_0001255
organ id: UBERON_0000056
organ id: UBERON_0002048
organ id: UBERON_0002097
organ id: UBERON_0002108
organ id: UBERON_0001264
organ id: UBERON_0001465
organ id: UBERON_0002367
organ id: UBERON_0002240
organ id: UBERON_0000059
organ id: UBERON_0000992
organ id: UBERON_0001987
organ id: UBERON_0002106
organ id: UBERON_0004536
organ id: UBERON_0003126
organ id: UBERON_0003889
organ id: UBERON_0002113
organ id: UBERON_0000948
organ id: UBERON_0000995
organ id: UBERON_0001270
organ id: UBERON_0004288
additional type: vocab
date created: 2025-08-11
name: hp
version: v20251124
version: v20250811
dataset: v20250811
dataset: v20251124
last: v20251124

HuBMAP Research Attributes Value Set
type: Catalog
latest version: v2.13.10
additional type: vocab
date created: 2024-11-20
name: hravs
version: v2.13.10
version: v2.11.0
version: v2.5.3
version: v2.3.34
version: v2.2.1
version: v2.2.0
dataset: v2.13.10
dataset: v2.2.0
dataset: v2.2.1
dataset: v2.11.0
dataset: v2.3.34
dataset: v2.5.3
last: v2.13.10

LMHA Ontology
type: Catalog
cell count: 2
latest version: v1.4
additional type: vocab
date created: 2019-07-30
name: lmha
version: v1.4
dataset: v1.4
last: v1.4

LOINC Document Ontology
type: Catalog
latest version: v2.82
additional type: vocab
date created: 2026-02-17
name: loinc
version: v2.82
dataset: v2.82
last: v2.82

Provisional Cell Ontology
type: Catalog
cell count: 650
latest version: v20250708
organ: spinal cord
organ: lung
organ id: UBERON_0002240
organ id: UBERON_0002048
additional type: vocab
date created: 2025-07-08
name: pcl
version: v20250708
version: v20250108
version: v20240711
version: v20240104
dataset: v20250108
dataset: v20240104
dataset: v20240711
dataset: v20250708
last: v20250708

OBO Relations Ontology
type: Catalog
latest version: v20250624
additional type: vocab
date created: 2025-06-24
name: ro
version: v20250624
version: v20250305
version: v20240424
version: v20240213
version: v20230818
dataset: v20250624
dataset: v20250305
dataset: v20240213
dataset: v20240424
dataset: v20230818
last: v20250624

Uber-anatomy Ontology
type: Catalog
cell count: 303
latest version: v20250815
organ: fallopian tube
organ: pancreas
organ: knee
organ: urinary bladder
organ: brain
organ: large intestine
organ: lung
organ: spleen
organ: ureter
organ: liver
organ: skeleton
organ: prostate gland
organ: placenta
organ: heart
organ: ovary
organ: lymph node
organ: blood vasculature
organ: extrapulmonary bronchus
organ: pelvis
organ: eye
organ: kidney
organ: uterus
organ: thymus
organ: small intestine
organ: lymph vasculature
organ: skin
organ: trachea
organ: mouth
organ: spinal cord
organ id: UBERON_0002097
organ id: UBERON_0001465
organ id: UBERON_0003126
organ id: UBERON_0004536
organ id: UBERON_0001264
organ id: UBERON_0002182
organ id: UBERON_0000029
organ id: UBERON_0000056
organ id: UBERON_0001987
organ id: UBERON_0002108
organ id: UBERON_0004537
organ id: UBERON_0000059
organ id: UBERON_0004288
organ id: UBERON_0002367
organ id: UBERON_0001255
organ id: UBERON_0000970
organ id: UBERON_0002106
organ id: UBERON_0002113
organ id: UBERON_0002370
organ id: UBERON_0002240
organ id: UBERON_0001270
organ id: UBERON_0000955
organ id: UBERON_0002048
organ id: UBERON_0000948
organ id: UBERON_0000995
organ id: UBERON_0002107
organ id: UBERON_0000165
organ id: UBERON_0003889
organ id: UBERON_0000992
additional type: vocab
date created: 2025-08-15
name: uberon
version: v20250815
version: v20250528
version: v20241125
version: v20240903
version: v20240513
version: v20240322
version: v20240220
version: v20231208
dataset: v20250528
dataset: v20250815
dataset: v20240513
dataset: v20240220
dataset: v20240903
dataset: v20231208
dataset: v20241125

(Experimental) Vasculature Common Coordinate Framework Ontology
type: Catalog
latest version: v20240223
organ: spleen
organ: trachea
organ: liver
organ id: UBERON_0002106
organ id: UBERON_0003126
organ id: UBERON_0002107
additional type: vocab
date created: 2024-02-13
name: vccf
version: v20240223
dataset: v20240223
last: v20240223